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Publications

Special Issue

Special Issue

Special Issue

Plant, Cell & Environment published a Special Issue on “Stress Priming, Memory and Signalling in Plants”.

The issue is available online at: https://onlinelibrary.wiley.com/toc/13653040/2019/42/3.

Several CRC 973 PIs contributed to this issue by review articles or original articles. Monika Hilker and Thomas Schmülling served as guest editors.

Review Article

Several CRC 973 PIs published a review article on "Priming and memory of stress responses in organisms lacking a nervous system". You find the article here: https://onlinelibrary.wiley.com/doi/full/10.1111/brv.12215

2020

  • Abuelsoud, W., Cortleven, A. and Schmülling, T. (2020). Photoperiod stress alters the cellular redox status and is associated with an increased peroxidase and decreased catalase activity. bioRxiv doi: 10.1101/2020.03.05.978270.

  • Bäurle, I. and Trindade, I. (2020). Chromatin regulation of somatic abiotic stress memory. J. Exp. Bot. doi: 10.1093/jxb/eraa098.

  • Bittner, A., Griebel, T., van Buer, J., Juszczak-Debosz, I. and Baier, M. (2020). Determining the ROS and antioxidant status of leaves during cold acclimation. In: Hincha, D., Zuther, E., editors. Methods in molecular biology (Clifton, N.J.). Plant cold acclimation: methods and protocols. 2nd ed. New York: Springer; 2020. (in press).

  • Bittner, A., van Buer, J. and Baier, M. (2020). Cold priming uncouples light- and cold-regulation of gene expression in Arabidopsis thaliana. BMC Plant Biol. doi: 10.1186/s12870-020-02487-0.

  • Castellanos, R.U., Friedrich, T., Petrovic, N., Altmann, S., Brzezinka, K., Gorka, M., Graf, A. and Bäurle, I. (2020). FORGETTER2 protein phosphatase and phospholipase D modulate heat stress memory in Arabidopsis. Plant J. doi: 10.1111/tpj.14927.

  • Durian, G., Sedaghatmehr, M., Matallana-Ramirez, L.P., Schilling, S., Schaepe, S., Guerra, T., Herde, M., Witte, C.-P.,  Mueller-Roeber, B., Schulze, W.X., Balazadeh, S. and Romeis, T. (2020). Calcium-dependent protein kinase CPK1 controls cell death by in vivo phosphorylation of senescence master regulator ORE1. Plant Cell 32: 1610-1625, doi: 10.1105/tpc.19.00810.

  • El Shazely, B., Yu, G., Johnston, P.R. and Rolff, J. (2020). Resistance evolution against antimicrobial peptides in Staphylococcus aureus alters pharmacodynamics beyond the MIC. Front. Microbiol. 11: 103, doi: 10.3389/fmicb.2020.00103.

  • Frank, M., Cortleven, A., Novak, O. and Schmülling, T. (2020). Root-derived trans-zeatin cytokinin protects Arabidopsis plants against photoperiod stress. Plant Cell Environ. doi: 10.1111/pce.13860.

  • Griebel, T.,  Ebert, A., Nguyen, H.H. and Baier, M. (2020). Cold priming memory reduces plant pathogen susceptibility based on a functional plastid peroxidase system. bioRxiv doi: 10.1101/2020.02.19.956540.

  • Griese, E., Pineda, A., Pashalidou, F.G., Pizarro Iradi, E., Hilker, M., Dicke, M. and Fatouros, N.E. (2020). Plant responses to butterfly oviposition partly explain preference–performance relationships on different brassicaceous species. Oecologia 192: 463-475, doi: 10.1007/s00442-019-04590-y.

  • Gonzáles-Tortuero, E. and Rodriguez-Rojas, A. (2020). Amino acid oxidation constrained protein sequences during evolution: an analysis of a model bacterium. bioRxiv doi: 10.1101/2020.06.24.169870.

  • Guerra, T., Schilling, S., Hake, K., Gorzolka, K., Sylvester, F.-P., Conrads, B., Westermann, B. and Romeis, T. (2020). Calcium-dependent protein kinase 5 links calcium-signaling with N-hydroxy-L-pipecolic acid- and SARD1-dependent immune memory in systemic acquired resistance. New Phytol. 225: 310-325, doi: 10.1111/nph.16147.

  • Illgen, S., Zintl, S., Zuther, E., Hincha, D.K. and Schmülling, T. (2020). Characterisation of the ERF102 to ERF105 genes of Arabidopsis thaliana and their role in the response to cold stress. Plant Mol. Biol. 103: 303-320, doi: 10.1007/s11103-020-00993-1.

  • Lazzaro, B., Zasloff, M. and Rolff, J. (2020). Antimicrobial peptides: application informed by evolution. Science doi: 10.1126/science.aau5480.

  • Leuendorf, J.E., Frank, M. and Schmülling, T. (2020). Acclimation, priming and memory in the response of Arabidopsis thaliana seedlings to cold stress. Sci. Rep. 10: 689, doi: 10.1038/s41598-019-56797-x.

  • Linzner, N., Fritsch, V.N., Busche, T., Tung, Q.N., Loi, V.V., Bernhardt, J., Kalinowski, J. and Antelmann, H. (2020). The plant-derived naphthoquinone lapachol causes an oxidative stressresponse in Staphylococcus aureus. Free Radic. Biol. Med. 158: 126-136, doi: 10.1016/j.freeradbiomed.2020.07.025.

  • Paniagua Voirol, L.R., Valsamakis, G., Lortzing, V., Weinhold, A., Johnston, P.R., Fatouros, N., Kunze, R. and Hilker, M. (2020). Plant responses to insect eggs are not induced by egg‐associated microbes, but by a secretion attached to the eggs. Plant Cell Environ. 43: 1815-1826, doi: 10.1111/pce.13746.

  • Paniagua Voirol, L.R., Weinhold, A., Johnston, P.R., Fatouros, N.E. and Hilker, M. (2020). Legacy of a butterfly's parental microbiome on offspring performance. Appl. Environm. Microbiol. 86: e00596-20, doi: 10.1128/AEM.00596-20.

  • Rodríguez-Rojas, A., Kim, J., Johnston, P., Makarova, O., Eravci, M., Weise, C., Hengge, R. and Rolff, J. (2020). Non-lethal exposure to H2O2 boosts bacterial survival and evolvability against oxidative stress. PLoS Genet. doi: 10.1371/journal.pgen.1008649. (see publication in 2019 for bioRxiv version)

  • Rodriguez-Rojas, A., Nath, A., El Shazelym, B., Santi, G., Kim, J., Kuropka, B., Weise, C. and Rolff, J. (2020). Antimicrobial peptide induced-stress renders Staphylococcus aureus susceptible to toxic nucleoside analogues. bioRxiv doi: 10.1101/2020.03.30.015206.

  • Schaarschmidt, S., Fischer, A., Zuther, E. and Hincha, D.K. (2020). Evaluation of seven different RNA-Seq alignment tools based on experimental data from the model plant Arabidopsis thaliana. Int. J. Mol. Sci. 21: 1720, doi: 10.3390/ijms21051720.

  • Szymczak, A., Ryo, M., Roy, J. and Rillig, M.C. (2020). Diversity of growth responses of soil saprobic fungi to recurring heat events. Front. Microbiol. doi: 10.3389/fmicb.2020.01326.

  • Thirumalaikumar, V.P., Wagner, M., Balazadeh, S. and Skirycz A. (2020). Autophagy is responsible for the accumulation of proteogenic dipeptides in response to heat stress in Arabidopsis thaliana. bioRxiv doi: 10.1101/2020.03.25.004978.
  • Tung, Q. N., Busche, T., Van Loi, V., Kalinowski, J. and Antelmann, H. (2020). The redox-sensing MarR-type repressor HypS controls hypochlorite and antimicrobial resistance in Mycrobacterium smegmatis. Free Rad. Biol. Med. 147: 252-261, doi: 10.1016/j.freeradbiomed.2019.12.032.
  • Van Loi, V. and Antelmann, H. (2020). Method for measurement of bacillithiol redox potential changes using the Brx-roGFP2 redox biosensor in Staphylococcus aureus. MethodsX 7, doi: 10.1016/j.mex.2020.100900.
  • Vyse, K., Faivre, L., Romich, M., Pagter, M., Schubert, D., Hincha, D.K. and Zuther, E. (2020). Transcriptional and post-transcriptional regulation and transcriptional memory of chromatin regulators in response to low temperature. Front. Plant Sci. 11: 39, doi: 10.3389/fpls.2020.00039. (see publication in 2019 for bioRxiv version)

  • Vyse, K., Penzlin, J., Sergeant, K., Hincha, D.K., Arora, R. and Zuther, E. (2020). Repair of sub-lethal freezing damage in leaves of Arabidopsis thaliana. BMC Plant Biol. doi: 10.1186/s12870-020-2247-3.

  • Wesener, F., Szymczak, A., Rillig, M.C. and Tietjen, B. (2020). Stress priming affects fungal competition – evidence from a combined experimental and modeling study. bioRxiv doi: 10.1101/2020.03.04.976357.

2019

  • Bittner, N., Hundacker, J., Achotegui-Castells, A., Anderbrant, O. and Hilker, M. (2019). Defense of Scots pine against sawfly eggs (Diprion pini) is primed by exposure to sawfly sex pheromones. PNAS 116: 24668-24675, doi: 10.1073/pnas.1910991116.

  • Brzezinka, K., Altmann, S. and Bäurle, I. (2019). BRUSHY1/TONSOKU/MGOUN3 is required for heat stress memory. Plant Cell Environ. 42: 765-775, doi: 10.1111/pce.13365.

  • Cortleven, A., Leuendorf, J.E., Frank, M., Bolt, S., Pezzetta, D. and Schmülling, T. (2019). Cytokinin action in response to abiotic and biotic stresses in plants. Plant Cell Environ. 42: 998-1018, doi: 10.1111/pce.13494.

  • Elabed, H., González-Tortuero, E., Ibacache-Quiroga, C., Bakhrouf, A., Johnston, P., Kamel G., Blázquez, J. and Rodríguez-Rojas, A. (2019). Seawater salt-trapped Pseudomonas Aeruginosa survives for years and gets primed for salinity tolerance. BMC Microbiol. 19: 142, doi: 10.1186/s12866-019-1499-2.

  • El Shazely, B., Urbański, A., Johnston, P. R. and Rolff, J. (2019). In Vivo exposure of insect AMP resistant Staphylococcus aureus to an insect immune system. Insect Bioch. Mol. Biol. 110: 60–68, doi: 10.1016/j.ibmb.2019.04.017.

  • Friedrich, T., Faivre, L., Bäurle, I. and Schubert, D. (2019). Chromatin‐based mechanisms of temperature memory in plants. Plant Cell Environ. 42: 756-764, doi: 10.1111/pce.13373.

  • Fritsch, V.N., Loi, V.V., Busche, T., Sommer, A., Nürnberg, D.J., Tedin, K., Kalinowski, J., Bernhardt, J., Fulde, M. and Antelmann, H. (2019). The MarR-type repressor MhqR repressor confers resistance to quinone-like antimicrobials in Staphylococcus aureus. Antioxid. Redox Signal. 31: 1235-1252, doi: 10.1089/ars.2019.7750.

  • Hilker, M. and Schmülling, T. (2019). Stress priming, memory, and signalling in plants. Plant Cell Environ. 42: 753-761, doi: 10.1111/pce.13526.

  • Illgen, S., Zintl, S., Zuther, E., Hincha, D.K. and Schmülling, T. (2019). Characterisation of the ERF102 to ERF105 genes of Arabidopsis thaliana and their role in the response to cold stress. bioRxiv doi: 10.1101/848705.

  • Kafle, D. and Wurst, S. (2019). Legacy effects of herbivory enhance performance and resistance of progeny plants. J. Ecol. 107: 58-68, doi: 10.1111/1365-2745.13038.

  • Lortzing, V., Oberländer, J., Lortzing, T., Tohge, T., Steppuhn, A., Kunze, R. and Hilker, M. (2019). Insect egg deposition renders plant defense against hatching larvae more effective in a salicylic acid-dependent manner. Plant Cell Environ. 42: 1019-1032, doi: 10.1111/pce.13447.

  • Loi, V.V., Huyen, N.T.T., Busche, T., Tung, Q.N., Gruhlke, M.C.H., Kalinowski, J., Bernhardt, J., Slusarenko, A.J., and Antelmann, H. (2019). Staphylococcus aureus responds to allicin by global S-thioallylation - Role of the Brx/BSH/YpdA pathway and the disulfide reductase MerA to overcome allicin stress. Free Radic. Biol. Med. 139: 55-69, doi: 10.1016/j.freeradbiomed.2019.05.018.

  • Ma, X., Balazadeh, S. and Mueller-Roeber, B. (2019). Tomato fruit ripening factor NOR controls leaf senescence. J. Exp. Bot. 70: 2727-2740, doi: 10.1093/jxb/erz098.

  • Mikulski, P., Hohenstatt, M.L., Farrona, S., Smaczniak, C., Stahl, Y.S., Kalyanikrishna, Kaufmann, K., Angenent, G. and Schubert, D. (2019). The chromatin-associated protein PWO1 interacts with plant nuclear lamin-like components to regulate nuclear size. Plant Cell: 1141–1154, doi: 10.1105/tpc.18.00663.

  • Oberländer, J., Lortzing, V., Hilker, M. and Kunze, R. (2019). The differential response of cold- experienced Arabidopsis thaliana to larval herbivory benefits an insect generalist, but not a specialist. BMC Plant Biol. 19: 338, doi: 10.1186/s12870-019-1943-3.

  • Ratzmann, G., Meinzer, F.C. and Tietjen, B. (2019). Iso/anisohydry: still a useful concept. Trends Plant Sci.24: 191-194, doi: 10.1016/j.tplants.2019.01.001.

  • Ratzmann, G., Zakharova, L. and Tietjen, B. (2019). Optimal leaf water status regulation of plants in drylands. Sci. Rep. 9: 3768, doi: 10.1038/s41598-019-40448-2.

  • Rillig, M.C., Bonneval, K. and Lehmann, J. (2019) Sounds of soil: A new world of interactions under out feet? Soil Syst. 3: 45, doi: 10.3390/soilsystems3030045.

  • Rodríguez-Rojas, A., Kim, J., Johnston, P., Makarova, O., Eravci, M., Weise, C., Hengge, R. and Rolff, J. (2019). Non-lethal oxidative stress boosts bacterial survival and evolvability under lethal exposure. bioRxiv doi: 10.1101/575134. (see publication in 2020 for peer-reviewed version)

  • Ryo, M., Aguilar-Trigueros, C.A., Pinek, L., Muller, L.A.H. and Rillig M.C. (2019). Basic principles of temporal dynamics. Trends Ecol. Evol. 34: 723-733, doi: 10.1016/j.tree.2019.03.007.

  • Schubert, D. (2019). Evolution of Polycomb-group function in the green lineage. F1000Research 8: 268, doi: 10.12688/f1000research.16986.1.

  • Schwachtje, J., Whitcomb, S.J., Firmino, A.A.P., Zuther, E., Hincha, D.K. and Kopka, J. (2019) Induced, imprinted, and primed responses to changing environments: Does metabolism store and process information? Front. Plant Sci. 10: 106, doi: 10.3389/fpls.2019.00106.

  • Sedaghatmehr, M., Thirumalaikumar, V. P., Kamranfar, I., Marmagne, A., Masclaux-Daubresse, C. and Balazadeh, S. (2018). A regulatory role of autophagy for resetting the memory of heat stress in plants. Plant Cell Environ. 42: 1053-1063, doi: 10.1111/pce.13426.

  • Seybold, H., Bortlik, J., Conrads, B., Hoehenwarter, W. and Romeis, T. (2019). Prioritization of abiotic and biotic stress responses by direct linkage of ABI1 phosphatase and CPK5 calcium-dependent protein kinase. bioRxiv. doi: 10.1101/839662.

  • Szymczak, A., Ryo, M. and Rillig, M.C. (2019). Diversity of responses of soil saprobic fungi to recurring heat events. bioRxiv doi: 10.1101/733923.

  • Takahashi, D., Gorka, M., Erban, A., Graf, A., Kopka, J., Zuther, E. and Hincha, D.K. (2019). Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Sci. Rep. 9: 2289, doi: 10.1038/s41598-019-38688-3.

  • van Buer, J., Prescher, A. and Baier M. (2019). Cold-priming of chloroplast ROS signalling is developmentally regulated and is locally controlled at the thylakoid membrane. Sci. Rep. 9: 3022, doi: 10.1038/s41598-019-39838-3.

  • Vyse, K., Faivre, L., Romich, M., Pagter, M., Schubert, D., Hincha, D.K. and Zuther, E. (2019). Transcriptional and post-transcriptional regulation and transcriptional memory of chromatin regulators in response to low temperature. bioRxiv 10.1101/757179. (see publication in 2020 for peer-reviewed version)

  • Vyse, K., Pagter, M., Zuther, E. and Hincha, D.K. (2019). Deacclimation after cold acclimation - a crucial, but widely neglected part of plant winter survival. J. Exp. Botany 70: 4595-4604, doi: 10.1093/jxb/erz229.

  • Wesener, F. and Tietjen, B. (2019). Primed to be strong, primed to be fast: modeling benefits of microbial stress responses. FEMS Microbiol. Ecol., fiz114, doi: 10.1093/femsec/fiz114.

  • Zuther, E., Schaarschmidt, S., Fischer, A., Erban, A., Pagter, M., Mubeen, U., Giavalisco, P., Kopka, J., Sprenger, H. and Hincha, D.K. (2019).Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant Cell Environ. 42: 854-873, doi: 10.1111/pce.13502.

2018

  • Altmann, S., Muino, J.M., Lortzing, V., Brandt, R., Himmelbach, A., Altschmied, L. and Hilker, M. (2018). Transcriptomic basis for reinforcement of elm anti-herbivore defense mediated by inect egg deposition. Mol. Ecol. 27: 4901-4915, doi: 10.1111/mec.14900.

  • Auevechanichkul, N., Lintermann, R. and Wirthmueller, L. (2018). Production of magnetic GFP affinity beads. Protocol on Figshare, doi: 10.6084/m9.figshare.6894248.v1.

  • Baier, M., Bittner, A., Prescher, A. and van Buer, J. (2018). Preparing plants for improved cold tolerance by priming. Plant Cell Environ. 42: 776-794, doi: 10.1111/pce.13394.

  • Baldauf, S., Ladrón de Guevara, M., Maestre, F.T. and Tietjen, B. (2018). Soil moisture dynamics under two rainfall frequency treatments drive early spring CO2 gas exchange of lichen-dominated biocrusts in central Spain. PeerJ. 6: e5904, doi: 10.7717/peerj.5904.

  • Brzezinka, K., Altmann, S. and Bäurle, I. (2018). BRUSHY1/TONSOKU/MGOUN3 is required for heat stress memory. Plant Cell Environ. 42: 765-775, doi: 10.1111/pce.13365.

  • Chen, C., De Masi, R., Lintermann, R. and Wirthmueller, L. (2018). Nuclear import of Arabidopsis poly (ADP-ribose) polymerase 2 is mediated by importin-α and a nuclear localization sequence located between the predicted SAP domains. Front. Plant Sci. 9: 1581, doi: 10.3389/fpls.2018.01581.

  • Cortleven, A., Leuendorf, J. E., Frank, M., Pezzetta, D., Bolt, S. and Schmülling, T. (2018). Cytokinin action in response to abiotic and bioticstress in plants. Plant Cell Environ. 42: 998–1018, doi: 10.1111/pce.13494.

  • Drok, S., Bandoly, M., Stelzer, S., Lortzing, T. and Steppuhn, A. (2018). Moth oviposition shapes the species-specific transcriptional and phytohormonal response of Nicotiana attenuata to larval feeding. Sci. Rep. 8: 10249, doi: 10.1038/s41598-018-28233-z.

  • Etemadi, M., Zuther, E., Müller, H., Hincha, D.K. and Berg, G. (2018). Ecotype-dependent response of bacterial communities associated with Arabidopsis to cold acclimation. Phytobiomes 2: 3-13, doi: 10.1094/PBIOMES-04-17-0015-R.

  • Geuss, D., Lortzing, T., Schwachtje, J., Kopka, J. and Steppuhn, A. (2018). Oviposition by Spodoptera exigua on Solanum dulcamara alters the plant's response to herbivory and impairs larval performance. Internatl. J. Mol. Sci. 19: 4008, doi: 10.3390/ijms19124008.

  • Hake, K. and Romeis, T. (2018). Protein kinase‐mediated signaling in priming: immune signal initiation, propagation, and establishment of long‐term pathogen resistance in plants. Plant Cell Environ. 42: 898-911, doi: 10.1111/pce.13429.

  • Hohenstatt, M.L., Mikulski, P., Komarynets, O. , Klose, C., Kycia, I., Jeltsch, A., Farrona, S. and Schubert, D. (2018). PWWP-DOMAIN INTERACTOR OF POLYCOMBS1 interacts with polycomb-group proteins and histones and regulates Arabidopsis flowering and development. Plant Cell 30: 117-133, doi: 10.1105/tpc.17.00117.

  • Imber, M., Huyen, N.T.T., Pietrzyk-Brzezinska, A.J., Loi, V.V., Hillion, M., Bernhardt, J., Thärichen, L., Kolšek, K., Saleh, M., Hamilton, C.J., Adrian, L., Gräter, F., Wahl, M.C. and Antelmann H. (2018). Protein S-bacillithiolation functions in thiol protection and redox regulation of the glyceraldehyde-3-phosphate dehydrogenase gap in Staphylococcus aureus under hypochlorite stress. Antioxid. Redox Signal. 28: 410-430, doi: 10.1089/ars.2016.6897.

  • Imber, M., Loi, V.V., Reznikov, S., Fritsch, V.N., Pietrzyk-Brzezinska, A.J., Prehn, J., Hamilton, C.J., Wahl, M.C., Bronowska, A.K. and Antelmann, H. (2018). The aldehyde dehydrogenase AldA contributes to the hypochlorite defense and is redox-controlled by protein S-bacillithiolation in Staphylococcus aureus. Redox Biol. 15: 557-568, doi: 10.1016/j.redox.2018.02.001.

  • Jouvet, L., Rodríguez-Rojas, A. and Steiner, U. (2018). Demographic variability and heterogeneity among individuals within and among clonal bacteria strains. Oikos 127: 728–737, doi: 10.1111/oik.04292.

  • Kamranfar, I., Xue, G.P., Tohge, T., Sedaghatmehr, M., Fernie, A.R., Balazadeh, S. and Mueller-Roeber, B.(2018). Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence. New Phytol. 218: 1543-1557, doi: 10.1111/nph.15127.

  • Kudla, J., Becker. D., Grill, E., Hedrich, R., Hippler, M., Kummer, U., Parniske, M., Romeis, T. and Schumacher, K. (2018). Advances and current challenges in calcium signaling. New Phytol. 218:414-431, doi: 10.1111/nph.14966.

  • Liu, H-C., Lämke, J., Lin, S-Y., Hung, M.-J., Liu, K.-M., Charng, Y.-Y. and Bäurle, I. (2018). Distinct heat shock factors and chromatin modifications mediate the organ-autonomous transcriptional memory of heat stress. Plant J. 95: 401-413, doi: 10.1111/tpj.13958.

  • Loi, V.V., Busche, T., Bernhardt, J., Tedin, K., Wollenhaupt, J., Huyen, N.T.T., Weise, C., Kalinowski, J., Wahl, M., Fulde, M. and Antelmann, H. (2018). Redox-sensing under hypochlorite stress and infection conditions by the Rrf2-family repressor HypR in Staphylococcus aureus. Antioxid. Redox Sign. 29: 615-636, doi: 10.1089/ars.2017.7354.

  • Lortzing, V., Oberländer, J., Lortzing, T., Tohge, T., Steppuhn, A., Kunze, R. and Hilker, M. (2018). Insect egg deposition renders plant defense against hatching larvae more effective in a salicylic acid-dependent manner. Plant Cell Environ. 42: 1019–1032, doi: 10.1111/pce.13447.

  • Makarova, O., Johnston, P., Rodriguez-Rojas, A., El Shazely, B., Moreno-Morales, J. and Rolff, J. (2018). Genomics of experimental adaptation of Staphylococcus aureus to a natural combination of insect antimicrobial peptides. Sci. Rep. 8: 15359, doi: 10.1038/s41598-018-33593-7.

  • Nietzsche, M., Guerra, T., Alseekh, S., Wiermer, M., Sonnewald, S., Fernie, A.R. and Börnke, F. (2018). STOREKEEPER RELATED 1/G-element binding protein (STKR1) interacts with protein kinase SnRK1. Plant Physiol. 176: 1773-1792, doi: 10.1104/pp.17.01461.

  • Omidbakhshfard, M.A., Fujikura, U., Olas, J.J., Xue, G.-P., Balazadeh, S. and Mueller-Roeber, B. (2018). GROWTH-REGULATING FACTOR 9 negatively regulates Arabidopsis leaf growth by controlling ORG3 and restricting cell proliferation in leaf primordia. PLoS Genet. 14: e1007484, doi: 10.1371/journal.pgen.1007484.

  • Rodriguez-Rojas, A., Moreno-Morales, J., Mason, A.J. and Rolff, J. (2018). Cationic antimicrobial peptides do not change recombination frequency in Escherichia coli. Biol. Lett. 14: 20180006, doi: 10.1098/rsbl.2018.0006.

  • Schwachtje, J., Fischer, A., Erban, A. and Kopka, J. (2018). Primed primary metabolism in systemic leaves: a functional systems analysis. Sci. Rep. 8: 216, doi: 10.1038/s41598-017-18397-5.

  • Sprenger, H., Erban, A., Seddig, S., Rudack, K., Thalhammer, A., Le, M.Q., Walther, D., Zuther, E., Köhl, K., Kopka, J. and Hincha, D.K. (2018). Metabolite and transcript markers for the prediction of potato drought tolerance. Plant Biotechnol. J. 16: 939-950, doi: 10.1111/pbi.12840.

  • Thirumalaikumar, V.P., Devkar, V., Mehterov, N., Ali, S., Ozgur, R., Turkan, I., Mueller-Roeber, B. and Balazadeh, S. (2018). NAC transcription factor JUNGBRUNNEN1 enhances drought tolerance in tomato. Plant Biotechnol. J. 16: 354-366, doi: 10.1111/pbi.12776.

  • Tung, Q.N., Linzner, N., Loi, V.V. and Antelmann, H. (2018). Application of genetically encoded redox biosensors to measure dynamic changes in the glutathione, bacillithiol and mycothiol redox potentials in pathogenic bacteria. Free Radic. Biol. Med. 128: 84-96, doi: 10.1016/j.freeradbiomed.2018.02.018.

  • Veresoglou, S.D., Wang, D., Andrade-Linares, D.R., Hempel, S. and Rillig, M.C. (2018). Fungal decision to exploit or explore depends on growth rate. Microb. Ecol. 75: 289-292, doi: 10.1007/s00248-017-1053-4.

  • Voirol, L.R.P., Frago, E., Kaltenpoth, M., Hilker, M. and Fatouros, N.E. (2018). Bacterial symbionts in Lepidoptera: Their diversity, transmission, and impact on the host. Front. Microbiol. 9: 556, doi: 10.3389/fmicb.2018.00556.

  • Weinhold, A. (2018). Transgenerational stress-adaption: an opportunity for ecological epigenetics. Plant Cell Rep. 37: 3-9, doi: 10.1007/s00299-017-2216-y.

  • Yang, G., Wagg, C., Veresoglou, S.D., Hempel, S. and Rillig, M.C. (2018). How soil biota drive ecosystem stability. Trends Plant Sci. 23: 1057-1067, doi: 10.1016/j.tplants.2018.09.007.

  • Yu, G., Baeder, D., Regoes, R., Rolff, J. (2018). Predicting drug resistance evolution: antimicrobial peptides vs. antibiotics. Proc. R. Soc. Lond. B. 285: 20172687, doi: 10.1098/rspb.2017.2687.

2017

  • Andersen, U.B., Kjaer, K.H., Erban, A., Alpers, J., Hincha, D.K., Kopka, J., Zuther, E. and Pagter, M. (2017). Impact of seasonal warming on overwintering and spring phenology of blackcurrant. Environ. Exp. Bot. 140: 96-109, doi: 10.1016/j.envexpbot.2017.06.005.

  • Bäurle, I. (2017). Can't remember to forget you: Chromatin-based priming of somatic stress responses. Semin. Cell Dev. Biol. 83: 133-139, doi: 10.1016/j.semcdb.2017.09.032.

  • Bolt, S., Zuther, E., Zintl, S., Hincha, D. K. and Schmülling, T. (2017). ERF105 is a transcription factor gene of Arabidopsis thaliana required for freezing tolerance and cold acclimation. Plant Cell Environ. 40: 108-120, doi: 10.1111/pce.12838.

  • Bremer, A., Kent, B., Hauß, T., Thalhammer, A., Yepuri, N.R., Darwish, T.A., Garvey, C.J., Bryant, G. and Hincha, D.K. (2017). Intrinsically disordered stress protein COR15A resides at the membrane surface during dehydration. Biophys. J. 113: 572-579, doi: 10.1016/j.bpj.2017.06.027.

  • Cvetkovic, J., Mueller, K. and Baier, M. (2017). The effect of cold priming on the fitness of Arabidopsis thaliana accessions under natural and controlled conditions. Sci. Rep. 7: 44055, doi: 10.1038/srep44055.

  • Geuss, D., Stelzer, S., Lortzing, T. and Steppuhn, A. (2017). Solanum dulcamara's response to insect oviposition. Plant Cell Environ. 40: 2663-2677, doi: 10.1111/pce.13015.

  • Griese, E., Dicke, M., Hilker, M. and Fatouros, N.E. (2017). Plant response to butterfly eggs: inducibility, severity and success of egg-killing leaf necrosis depends on plant genotype and egg clustering. Sci. Rep. 7: 7316, doi: 10.1038/s41598-017-06704-z.

  • Hedtmann, C., Guo, W., Reifschneider, E., Heiber, I., Hiltscher, H., van Buer, J., Barsch, A., Niehaus, K., Rowan, B., Lortzing, T., Steppuhn, A. and Baier, M. (2017). The plant immunity regulating F-Box protein CPR1 supports plastid function in absence of pathogens. Front. Plant Sci. 8: 1650, doi: 10.3389/fpls.2017.01650.

  • Kafle, D., Hänel, A., Lortzing, T., Steppuhn, A. and Wurst, S. (2017). Sequential above- and belowground herbivory modifies plant responses depending on herbivore identity. BMC Ecol. 17: 5, doi: 10.1186/s12898-017-0115-2.

  • Kleinmanns, J.A., Schatlowski, N., Heckmann, D. and Schubert D. (2017). BLISTER regulates polycomb-target genes, represses stress-regulated genes and promotes stress responses in Arabidopsis thaliana. Front Plant Sci. 8: 1530, 1-14, doi: 10.3389/fpls.2017.01530.

  • Lämke, J. and Bäurle, I. (2017). Epigenetic and chromatin-based mechanisms in environmental stress adaptation and stress memory in plants. Genome Biol. 18: 124, doi: 10.1186/s13059-017-1263-6.

  • Lira, B., Gramegna, G., Trench, B., Alves, F., Silva, É., Silva, G., Thirumalaikumar, V.P., Lupi, A., Demarco, D., Nogueira, F., Balazadeh, S., Freschi, L. and Rossi, M. (2017). Manipulation of a senescence-associated gene improves fleshy fruit yield in Solanum lycopersicum. Plant Physiol. 175: 77-91, doi: 10.1104/pp.17.00452.

  • Liu, N., Hake, K., Wang, W., Zhao, T., Romeis T. and Tang, D. (2017). CALCIUM‐DEPENDENT PROTEIN KINASE5 associates with the truncated NLR protein TIR‐NBS2 to contribute to exo70B1‐mediated immunity. Plant Cell 29: 746–759, doi: 10.1105/tpc.16.00822.

  • Lortzing, T., Firtzlaff, V., Nguyen, D., Rieu, I., Stelzer, S., Schad, M., Kallarackal, J. and Steppuhn, A. (2017). Transcriptomic responses of Solanum dulcamara to natural and simulated herbivory. Mol. Ecol. Res.17: 196-211, doi: 10.1111/1755-0998.12687.

  • Mikulski,  P., Komarynets, O., Fachinelli, F., Weber, A.P.M. and Schubert D. (2017). Characterization of the Polycomb-group mark H3K27me3 in unicellular algae. Front Plant Sci. 8: 607, doi: 10.3389/fpls.2017.00607.

  • Motlagh, S.E., Ribone, P.A., Thirumalaikumar, V.P., Allu, A.D., Chan, R.L., Mueller-Roeber, B. and Balazadeh, S. (2017). JUNGBRUNNEN1 confers drought tolerance downstream of the HD-Zip I transcription factor AtHB13. Front. Plant Sci. 8: 2118, doi: 10.3389/fpls.2017.02118.

  • Nitschke, S., Cortleven, A. and Schmülling, T. (2017). Novel stress in plants by altering the photoperiod. Trends in Plant Sci. 22: 913-916, doi: 10.1016/j.tplants.2017.09.005.

  • Pagter, M., Alpers, J., Erban, A., Kopka, J., Zuther, E. and Hincha, D. K. (2017). Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana. BMC Genomics 18: 731, doi: 10.1186/s12864-017-4126-3.

  • Pappas, M.L., Broekgaarden, C., Broufas, G.D., Kant, M.R., Messelink, G.J., Steppuhn, A., Wäckers, F.L. and van Dam, N.M. (2017). Induced plant defences in biological control: a double-edged sword. Pest Managem. Sci. 73: 1780-1788, doi: 10.1002/ps.4587.

  • Schäfer, M., Brütting, C., Xu, S., Ling, Z., Steppuhn, A., Baldwin, I.T. and Schuman, M.C. (2017). NaMYB8 regulates distinct, optimally distributed herbivore defense traits. J. Integr. Plant Biol. 12: 844-885, doi: 10.1111/jipb.12593.

2016

  • Andrade-Linares, D.R., Veresoglou, S.D. and Rillig, M.C. (2016). Temperature priming and memory in soil filamentous fungi. Fungal Ecol. 21: 10-15, doi: 10.1016/j.funeco.2016.02.002.

  • Andrade-Linares, D.R., Lehmann, A. and Rillig, M.C. (2016). Microbial stress priming – a meta-analysis. Environ. Microbiol. 18: 1277-1288, doi: 10.1111/1462-2920.13223.

  • Anjum, N.A., Khan, N.A., Sofo, A., Baier, M. and Kizek, R. (2016). Redox homeostasis managers in plants under environmental stresses. Front. Environ. Sci. 4: 35, doi: 10.3389/fenvs.2016.00035.

  • Austel, N., Eilers, E.J., Meiners, T. and Hilker, M. (2016). Elm leaves “warned” by insect egg deposition reduce survival of hatching larvae by a shift in their quantitative leaf metabolite pattern. Plant Cell Environ. 39: 366-376, doi: 10.1111/pce.12619.

  • Bandoly, M., Grichnik, R., Hilker, M. and Steppuhn, A. (2016). Priming of anti-herbivore defence in Nicotiana attenuata by insect oviposition: Herbivore specific effects. Plant Cell Environ. 39: 848-859, doi: 10.1111/pce.12677.

  • Bandoly, M. and Steppuhn, A. (2016). Bioassays to investigate the effects of insect oviposition on a plant’s resistance to herbivores. BioProtocol. 6: e1823, doi: 10.21769/BioProtoc.1823.

  • Bandoly, M. and Steppuhn, A. (2016). A push-button: Spodoptera exigua oviposition on Nicotiana attenuata dose-independently primes the feeding-induced plant defence. Plant Signal. Behav. 11: e1114198, doi: 10.1080/15592324.2015.1114198.

  • Bäurle I. (2016). Plant heat adaptation: priming in response to heat stress. F1000Research (F1000 Faculty Rev.): 694, doi: 10.12688/f1000research.7526.1.

  • Brzezinka, K., Altmann, S., Czesnick, H., Nicolas, P., Górka, M., Benke, E., Kabelitz, T., Jähne, F., Graf, A., Kappel, C. and Bäurle, I. (2016). Arabidopsis FORGETTER1 mediates stress-induced chromatin memory through nucleosome remodeling. eLife 5: e17061, doi: 10.7554/eLife.17061.

  • Cortleven, A., Marg, I., Yamburenko, M.V., Schlicke, H., Hill, K., Grimm, B., Schaller, E.G. and Schmülling, T. (2016). Cytokinin regulates the etioplast-chloroplast transition through the two-component signaling system and activation of chloroplast-related genes. Plant Physiol. 172: 464-478, doi: 10.1104/pp.16.00640.

  • Firtzlaff, V., Oberländer, J., Geiselhardt, S., Hilker, M. and Kunze, R. (2016). Pre-exposure of Arabidopsis to the abiotic or biotic environmental stimuli ´chilling´ or ´insect eggs´ exhibits different transcriptomic responses to herbivory. Sci. Rep. 6: 28544, doi: 10.1038/srep28544.

  • Hilker, M. and Fatouros, N.E. (2016). Resisting the onset of herbivory: plants perceive and respond to insect eggs. Curr. Opin. Plant Biol. 32: 9-16, doi: 10.1016/j.pbi.2016.05.003.

  • Hilker, M., Schwachtje, J., Baier, M., Balazadeh, S., Bäurle, I., Geiselhardt, S., Hincha, D.K., Kunze, R., Mueller-Roeber, B., Rillig, M.C., Romeis, T., Schmülling, T., Steppuhn, A., van Dongen, J., Whitcomb, S.J., Wurst, S., Zuther, E. and Kopka, J. (2016). Priming and memory of stress responses in organisms lacking a nervous system. Biol. Rev. 91: 1118-1133, doi: 10.1111/brv.12215.

  • Juszczak, I., Cvetkovic, J., Zuther, E., Hincha, D.K. and Baier, M. (2016). Natural variation of cold deacclimation correlates with variation of cold-acclimation of the plastid antioxidant system in Arabidopsis thaliana accessions. Front. Plant Sci. 7: 305, doi: 10.3389/fpls.2016.00305.

  • Kabelitz, T., Brzezinka, K., Friedrich, T., Gorka, M., Graf, A., Kappel, C. and Bäurle, I. (2016). A JUMONJI protein with E3 ligase and histone H3 binding activities affects transposon silencing in Arabidopsis. Plant Physiol. 171: 344-358, doi: 10.1104/pp.15.01688.

  • Lämke, J., Brzezinka, K., Altmann, S. and Bäurle, I. (2016). A hit-and-run HSF governs sustained histone methylation and transcriptional memory after heat stress. EMBO J. 35: 162-175, doi: 10.15252/embj.201592593.

  • Lämke, J., Brzezinka, K. and Bäurle, I. (2016). HSFA2 orchestrates transcriptional dynamics after heat stress in Arabidopsis thaliana. Transcription 7: 111-114, doi: 10.1080/21541264.2016.1187550.

  • Lortzing, T., Calf, O.W., Böhlke, M., Schwachtje, J., Kopka, J., Geuss, D., Kosanke, S., van Dam, N.M. and Steppuhn, A. (2016). Extrafloral nectar secretion from wounds of Solanum dulcamara. Nat. Plants 2: 16056, doi: 10.1038/nplants.2016.56.

  • Lortzing, T. and Steppuhn, A. (2016). Jasmonate signalling in plants shapes plant-insect interaction ecology. Curr. Opin. Insect Sci. 14: 32-39, doi: 10.1016/j.cois.2016.01.002.

  • Makarova, O., Rodriguez-Rojas, A., Erevci, M., Weise, C., Dobson, A., Johnston, P. and Rolff, J. (2016). Antimicrobial defence and persistent infection in insects revisited. Phil. Trans. Roy. Soc. B. 371: 1695, doi: 10.1098/rstb.2015.0296.

  • Nitschke, S., Cortleven, A., Iven, T., Feussner, I., Havaux, M., Riefler, M. and Schmülling, T. (2016). Circadian stress regimes affect the circadian clock and cause jasmonic acid-dependent cell death in cytokinin-deficient Arabidopsis plants. Plant Cell 28: 1616-39, doi: 10.1105/tpc.16.00016.  

  • Popova, A.V. and Hincha, D.K. (2016). Effects of flavonol glycosides on liposome stability during freezing and drying. Biochim. Biophys. Acta - Biomem. 1858: 3050-3060, doi: 10.1016/j.bbamem.2016.09.020.

  • Schulz, E., Tohge, T., Zuther, E., Fernie, A.R. and Hincha, D.K. (2016). Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana. Sci. Rep. 6: 34027, doi: 10.1038/srep34027.

  • Sedaghatmehr, M., Mueller-Roeber, B. and Balazadeh, S. (2016). The plastid metalloprotease FtsH6 and small heat shock protein HSP21 jointly regulate thermomemory in Arabidopsis. Nat. Comm. 7: 12439, doi: 10.1038/ncomms12439.

  • Shahnejat-Bushehri, S., Tarkowska, D., Sakuraba, Y. and Balazadeh, S. (2016). Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat. Plants 2: 16013, doi: 10.1038/nplants.2016.13.

  • Üstün, S., Sheikh, A., Gimenez-Ibanez, S., Jones, A., Ntoukakis, V. and Börnke, F. (2016). The proteasome acts as a hub for plant immunity and is targeted by pseudomonas type III effectors. Plant Physiol. 172: 1941-1958, doi: 10.1104/pp.16.00808.

  • van Buer, J., Cvetkovic, J. and Baier, M. (2016). Cold regulation of plastid ascorbate peroxidases serves as a priming hub controlling ROS signaling in Arabidopsis thaliana. BMC Plant Biol. 16:163, doi: 10.1186/s12870-016-0856-7.

2015

  • Aguilar-Trigueros, C.A., Hempel, S., Powell, J.R., Anderson, I.C., Antonovics, J., Bergmann, J., Cavagnaro, T.R., Chen, B.D., Hart, M.M., Klironomos, J., Petermann, J.S., Verbruggen, E., Veresoglou, S.D. and Rillig, M.C. (2015). Branching out: towards a trait-based understanding of fungal ecology. Fung. Biol. Rev. 29: 34-41, doi: 10.1016/j.fbr.2015.03.001.

  • Austel, N., Reinecke, A., Björkman, C., Hilker, M. and Meiners, T. (2015). Phenotypic plasticity in a willow leaf beetle depends on host plant species: Release and recognition of beetle odors. Chem. Sens. 40: 109-124, doi: 10.1093/chemse/bju065.

  • Bandoly, M., Hilker, M. and Steppuhn, A. (2015). Oviposition by Spodoptera exigua on Nicotiana attenuata primes induced plant defence against larval herbivory. Plant J. 83: 661-672, doi: 10.1111/tpj.12918.

  • Brenner, W.G. and Schmülling, T. (2015). Summarizing and exploring data of a decade of cytokinin-related transcriptomics. Front. Plant Sci. 6: 29, doi: 10.3389/fpls.2015.00029.

  • Büchel, K., Fenning, T., Gershenzon, J., Hilker, M. and Meiners, T. (2015). Elm defence against herbivores and pathogens: Morphological, chemical and molecular regulation aspects. Phytochem. Rev. 15: 961-983, doi: 10.1007/s11101-015-9442-0.

  • del Prete, S., Mikulski, P., Schubert, D. and Gaudin, V. (2015). One, two, three: polycomb proteins hit all dimensions of gene gegulation. Genes 6: 520-542, doi: 10.3390/genes6030520.

  • Garapati, P., Feil, R., Lunn, J.E., van Dijck, P., Balazadeh, S. and Mueller-Roeber, B. (2015). Transcription factor Arabidopsis activating Factor1 integrates carbon starvation responses with trehalose metabolism. Plant Physiol. 169: 379-390, doi: 10.1104/pp.15.00917.

  • Garapati, P., Xue, G.-P., Munné-Bosch, S. and Balazadeh, S. (2015). Transcription factor ATAF1 in Arabidopsis promotes senescence by direct regulation of key chloroplast maintenance and senescence transcriptional cascades. Plant Physiol. 168: 1122-1139, doi: 10.1104/pp.15.00567.

  • Hilker, M. and Fatouros, N.E. (2015). Plant responses to insect egg deposition. Annu. Rev. Entomol. 60: 493–515, doi: 10.1146/annurev-ento-010814-020620.

  • Le, M.Q., Pagter, M. and Hincha, D.K. (2015). Global changes in gene expression, assayed 25 by microarray hybridization and quantitative RT-PCR, during acclimation of three Arabidopsis thaliana accessions to sub-zero temperatures after cold acclimation. Plant Mol. Biol. 87: 1-15, doi: 10.1007/s11103-014-0256-z.

  • Matschi, S., Hake, K., Herde, M., Hause, B. and Romeis, T. (2015). Calcium-dependent protein kinase CPK28 regulates growth by stage-specific alteration of JA levels independent of 20 defense. Plant Cell 27: 591-606, doi: 10.1105/tpc.15.00024.

  • Monaghan, J., Matschi, S., Romeis, T. and Zipfel, C. (2015). The calcium-dependent protein kinase CPK28 negatively regulates BIK1-mediated PAMP-induced calcium burst. Plant Signal. Behav. 10: e1018497, doi: 10.1080/15592324.2015.1018497.

  • Pashalidou, F.G., Frago, E., Griese, E., Poelman, E.H., van Loon, J.J.A., Dicke, M. and Fatouros, N.E. (2015). Early herbivore alert matters: plant-mediated effects of egg deposition on higher trophic levels benefit plant fitness. Ecol. Lett. 18: 927-936, doi: 10.1111/ele.12470.

  • Petrov, V., Hille, J., Mueller-Roeber, B. and Gechev, T.S. (2015). ROS-mediated abiotic stress induced programmed cell death in plants. Front. Plant. Sci. 6: 69, doi: 10.3389/fpls.2015.00069.

  • Popova, A.V., Rausch, S., Hundertmark, M., Gibon, Y. and Hincha, D.K. (2015). The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Biochim. Biophys. Acta: 1517-1525, doi: 10.1016/j.bbapap.2015.05.002.

  • Rillig, M.C., Rolff, J., Tietjen, B., Wehner, J. and Andrade-Linares, D. (2015). Community priming – effects of sequential stressors on microbial assemblages. FEMS Microbiol. Ecol. 91: fiv040, doi: 10.1093/femsec/fiv040.

  • Rodriguez-Rojas, A., Makarova, O., Mueller, U. and Rolff, J. (2015). Cationic peptides facilitate iron-induced mutagenesis in bacteria, PLoS Genet. 11: e1005546, doi: 10.1371/journal.pgen.1005546.

  • Schöning, C. and Wurst, S. (2015). Positive effects of root-knot nematodes (Meloidogyne incognita) on nitrogen availability do not outweigh their negative effects on fitness in Nicotiana attenuata. Plant Soil 400: 381-390, doi: 10.1007/s11104-015-2738-4.

  • Schulz, E., Tohge, T., Zuther, E., Fernie, A.R. and Hincha, D.K. (2015). Natural variation in flavonol and anthocyanin metabolism during cold acclimation in Arabidopsis thaliana 30 accessions. Plant Cell Environ. 38: 1658-1672, doi: 10.1111/pce.12518.

  • Zuther, E., Juszczak, I., Lee, Y.P., Baier, M. and Hincha, D.K. (2015). Time-dependent deacclimation after cold acclimation in Arabidopsis thaliana accessions. Sci. Rep. 5: 12199, doi: 10.1038/srep12199.

2014

  • Aguilar-Trigueros, C.A., Powell, J.R., Anderson, I.C., Antonovics, J. and Rillig, M.C. (2014). Ecological understanding of root-infecting fungi using trait-based approaches. Trends Plant Sci. 19: 432-438, doi: 10.1016/j.tplants.2014.02.006.

  • Beyaert, I. and Hilker, M. (2014). Plant odour plumes as mediators of plant-insect interactions. Biol. Rev. 89: 68-81, doi: 10.1111/brv.12043.

  • Cortleven, A., Nitschke, S., Klaumünzer, M., AbdElgawad, H., Asard, H., Grimm, B., Lurz, R., Riefler, M. and Schmülling, T. (2014). A novel protective function for cytokinin in the light stress response is mediated through the AHK2 and AHK3 receptors. Plant Physiol. 164: 1470-1483, doi: 10.1104/pp.113.224667.

  • Dethloff, F., Erban, A., Orf, I., Alpers, J., Fehrle, I., Beine-Golovchuk, O., Schmidt, S., Schwachtje, J. and Kopka, J. (2014). Profiling methods to identify cold-regulated primary metabolites using gas chromatography coupled to mass spectrometry. Meth. Mol. Biol. 1166: 171-197. In: D.K. Hincha, E. Zuther (eds), Plant Cold Acclimation: Methods and Protocols, doi: 10.1007/978-1-4939-0844-8_14.

  • Dobson, A., Purves, J. and Rolff, J. (2014). Increased survival of experimentally evolved antimicrobial peptide-resistant S. aureus in an animal host. Evol. Appl. 7: 905-912, doi: 10.1111/eva.12184.

  • Hilker, M. (2014). New synthesis: Parallels between biodiversity and chemodiversity. J. Chem. Ecol. 40: 225-226, doi: 10.1007/s10886-014-0402-8.

  • Hiltscher, H., Rudnik, R., Shaikhali, J., Heiber, I., Mellenthin, M., Meirelles Duarte, I., Schuster, G., Kahmann, U. and Baier, M. (2014). The radical induced cell death protein 1 (RCD1) supports transcriptional activation of genes for chloroplast antioxidant enzymes. Front. Plant Sci. 5: 475, doi: 10.3389/fpls.2014.00475.

  • Hincha, D.K. and Zuther, E. (2014). Introduction - Plant cold acclimation and freezing tolerance. In: Plant Cold Acclimation. D.K. Hincha and E. Zuther (eds.), Methods in Molecular Biology, Vol. 1166, pp. 1-6, Springer Humana Press, New York, doi: 10.1007/978-1-4939-0844-8_1.

  • Hincha, D.K. and Zuther, E. (eds.) (2014). Plant Cold Acclimation, Methods in Molecular Biology, Vol. 1166, 282 pp., Springer Humana Press, New York, doi: 10.1007/978-1-4939-0844-8.

  • Huege, J., Goetze, J., Dethloff, F., Junker, B. and Kopka, J. (2014). Quantification of stable isotope label in metabolites via mass spectrometry. Methods Mol. Biol. 1056: 213-223, doi: 10.1007/978-1-62703-592-7_20.

  • Juszczak, I. and Baier, M. (2014). Quantification of superoxide and hydrogen peroxide in leaves. In: Plant Cold Acclimation. Methods and Protocols. D.K. Hincha and E. Zuther (eds.), Humana Press, pp. 217-224, doi: 10.1007/978-1-4939-0844-8_16.

  • Kabelitz, T., Kappel, C., Henneberger, K., Benke, E., Nöh, C. and Bäurle, I. (2014). eQTL mapping of transposon silencing reveals a position-dependent stable escape from epigenetic silencing and transposition of AtMu1 in the Arabidopsis lineage. Plant Cell 26: 3261-3271, doi: 10.1105/tpc.114.128512.

  • Kafle, D., Krähmer, A., Naumann, A. and Wurst, S. (2014). Genetic variation of the host plant species matters for interactions with above- and belowground herbivores. Insects 5: 651-667, doi: 10.3390/insects5030651.

  • Kumar, P., Pandit, S.S., Steppuhn, A. and Baldwin, I.T. (2014). Natural history-driven, plant-mediated RNAi-based study reveals CYP6B46’s role in a nicotine-mediated antipredator herbivore defense. P. Natl. Acad. Sci. 111: 1245-1252, doi: 10.1073/pnas.1314848111.

  • Lassig, R., Gutermuth, T., Bey, T.D., Konrad, K.R. and Romeis, T. (2014). Pollen tube NAD(P)H oxidases act as a speed control to dampen growth rate oscillations during polarized cell growth. Plant J. 78: 94-106, doi: 10.1111/tpj.12452.

  • Lu, D., Wang, T., Persson, S., Mueller-Roeber, B. and Schippers, J.H.M. (2014). Transcriptional control of ROS homeostasis by KUODA1 regulates cell expansion during leaf development. Nat. Commun. 5: 3767, doi: 10.1038/ncomms4767.

  • Mellenthin, M., Ellersiek, U., Börger, A. and Baier, M. (2014). Expression of the Arabidopsis sigma factor SIG5 is photoreceptor and photosynthesis controlled. Plants 3: 359-391, doi: 10.3390/plants3030359.

  • Monaghan, J., Matschi, S., Romeis, T. and Zipfel, C. 2015. The calcium-dependent protein kinase CPK28 negatively regulates BIK1-mediated PAMP-induced calcium burst. Plant Signal. Behav. 10: e1018497, doi: 10.1080/15592324.2015.1018497.

  • Monaghan, J., Matschi, S., Shorinola, O., Rovenich, H., Matei, A., Segonzac, C., Malinovsky, F.G., Rathjen, J.P., MacLean, D., Romeis, T. and Zipfel, C. (2014). The calcium-dependent protein kinase CPK28 buffers plant immunity and regulates BIK1 turnover. Cell Host Microbe 16: 605-615, doi: 10.1016/j.chom.2014.10.007.

  • Reinecke, A. and Hilker, M. (2014). Plant semiochemicals – perception and behavioural responses by insects. Annu. Plant Rev. 47: 115 – 154. In: Insect – Plant Interactions. C. Voelckel and G. Jander (eds.), Wiley, doi: 10.1002/9781118829783.ch4.  

  • Rodríguez-Rojas, A., Makarova, O. and Rolff, J. (2014). Antimicrobials, stress and mutagenesis. PLoS Pathog. 10: e1004445, doi: 10.1371/journal.ppat.1004445.

  • Romeis, T. and Herde, M. (2014). From local to global: CDPKs in systemic defense signaling upon microbial and herbivore attack. Curr. Opin. Plant Biol. 20: 1-10, doi: 10.1016/j.pbi.2014.03.002.

  • Schlicke, H., Hartwig, A.S., Firtzlaff, V., Richter, A.S., Glasser, C., Maier, K., Finkemeier, I. and Grimm B. (2014). Induced deactivation of genes encoding chlorophyll biosynthesis enzymes disentangles tetrapyrrole-mediated retrograde signaling. Mol. Plant 7: 1211-1227, doi: 10.1093/mp/ssu034.

  • Seybold, H., Trempel, F., Ranf, S., Scheel, D., Romeis, T. and Lee. J. (2014). Ca2+ signalling in plant immune response: from pattern recognition receptors to Ca2+ decoding mechanisms. New Phytol. 204: 782-790, doi: 10.1111/nph.13031.

  • Stief, A., Altmann, S., Hoffmann, K., Datt Pant, B., Scheible, W.-R. and Bäurle, I.(2014). Arabidopsis miR156 regulates tolerance to recurring environmental stress through SPL transcription factors. Plant Cell 26: 1792-1807, doi: 10.1105/tpc.114.123851.

  • Stief, A., Brzezinka, K., Lämke, J. and Bäurle, I. (2014). Epigenetic responses to heat stress at different time scales and the involvement of short RNAs. Plant Signal. Behav. 9: e970430, doi: 10.4161/15592316.2014.970430.

  • Thalhammer, A., Bryant, G., Sulpice, R. and Hincha, D.K. (2014). Disordered cold regulated15 proteins protect chloroplast membranes during freezing through binding and folding, but do not stabilize chloroplast enzymes in-vivo. Plant Physiol. 166: 190-201, doi: 10.1104/pp.114.245399.

  • Thalhammer, A. and Hincha, D.K. (2014). A mechanistic model of COR15 protein function in plant freezing tolerance: integration of structural and functional characteristics. Plant Signal. Behav. 9: e977722, doi: 10.4161/15592324.2014.977722.

  • Thalhammer, A., Hincha, D.K. and Zuther, E. (2014). Measuring freezing tolerance: electrolyte leakage and chlorophyll fluorescence assays. In: Plant Cold Acclimation. D.K. Hincha and E. Zuther E (eds.), Methods in Molecular Biology, Vol. 1166, pp. 15-24, Springer Humana Press, New York, doi: 10.1007/978-1-4939-0844-8_3.

  • Weckwerth, P., Ehlert B. and Romeis, T. (2014). ZmCPK1, a calcium-independent kinase member of the Zea mays CDPK gene family, functions as a negative regulator in cold stress signalling. Plant Cell Environ. 38: 544-58, doi: 10.1111/pce.12414.

2013

  • Duan, G., Christian, N., Schwachtje, J., Walther, D. and Ebenhöh, O. (2013). The metabolic interplay between plants and phytopathogens. Metabolites 3: 1-23, doi: 10.3390/metabo3010001.

  • Dubiella, U., Seybold, H., Durian, G., Komander, E., Lassig, R., Witte, C-P., Schulze W.X. and Romeis, T. (2013). Calcium-dependent protein kinase/NADPH oxidase activation circuit is required for rapid defense signal propagation. Proc. Natl. Acad. Sci. USA. 110: 8744-8749, doi: 10.1073/pnas.1221294110.

  • Dunn, W. B., Erban, A., Weber, R. J. M., Creek, D. J., Brown, M., Breitling, R., Hankemeier, T., Goodacre, R., Neumann, S., Kopka, J. and Viant, M. R. (2013). Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics. Metabolomics 9: S44-S66, doi: 10.1007/s11306-012-0434-4.

  • Gechev, T.S., Benina, M., Obata, T., Tohge, T., Sujeeth, N., Minkov, I., Hille, J., Temanni, M.R., Marriott, A.S., Bergström, E., Thomas-Oates, J., Antonio, C., Mueller-Roeber, B., Schippers, J.H., Fernie, A.R. and Toneva, V. (2013). Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis. Cell Mol. Life Sci. 70: 689-709, doi: 10.1007/s00018-012-1155-6.

  • Geiselhardt, S., Yoneya, K., Blenn, B., Drechsler, N., Gershenzon, J., Kunze, R. and Hilker, M. (2013). Egg laying of cabbage white butterfly (Pieris brassicae) on Arabidopsis thaliana affects subsequent performance of the larvae. PLoS ONE 8: e59661, doi: 10.1371/journal.pone.0059661.

  • Heiber, I., Wenguo, C. and Baier, M. (2013). Linking chloroplast antioxidant defence to carbohydrate availability: The transcript abundance of stromal ascorbate peroxidase is sugar controlled via ascorbate. Mol. Plant 7: 58-70, doi: 10.1093/mp/sst154.

  • Lee, Y.P., Giorgi, F.M., Lohse, M., Kvederaviciute, K., Klages, S., Usadel, B., Meskiene, I., Reinhardt, R. and Hincha, D.K. (2013). Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum). BMC Genomics 14: 793, doi: 10.1186/1471-2164-14-793.

  • Meissner, M., Orsini, E., Ruschhaupt, M., Melchinger, A.E., Hincha, D.K. and Heyer, A.G. (2013). Mapping quantitative trait loci for freezing tolerance in a recombinant inbred line population of Arabidopsis thaliana accessions Tenela and C24 reveals REVEILLE1 as negative regulator of cold acclimation. Plant Cell Environ. 36: 1256-1267, doi: 10.1111/pce.12054.

  • Scarpeci, T.E., Zanor, M.I., Mueller-Roeber, B. and Valle, E.M. (2013). Overexpression of AtWRKY30 enhances abiotic stress tolerance during early growth stages in Arabidopsis thaliana. Plant Mol. Biol. 3: 265-77, doi: 10.1007/s11103-013-0090-8.

  • Schmidt, M., Mieulet. D., Hubberten, H.-M., Obata, T., Hoefgen. R., Fernie, A.R., Fisahn, J., San Segundo, B., Guiderdoni, B., Schippers, J.H. and Mueller-Roeber, B. (2013). SALT-RESPONSIVE ERF1 regulates ROS-dependent signalling during the initial response to salt stress in rice. Plant Cell 6: 2115-31, doi: 10.1105/tpc.113.113068.

  • Strehmel, N., Kopka, J., Scheel, D. and Böttcher, C. (2013). Annotating unknown components from GC/EI-MS-based metabolite profiling experiments using GC/APCI(+)-QTOFMS. Metabolomics 10: 324-336, doi: 10.1007/s11306-013-0569-y.

  • Thalhammer, A. and Hincha, D.K. (2013). The function and evolution of closely related COR/LEA (Cold-Regulated/Late Embryogenesis Abundant) proteins in Arabidopsis thaliana. Plant and Microbe Adaptations to Cold in a Changing World, pp. 89-105, doi: 10.1007/978-1-4614-8253-6_8.

  • Ullrich Dubiella, U., Seybold, H., Durian, G., Komander, E., Lassig, R., Witte, C.-P., Schulze W.X. and Romeis, T. (2013). Calcium-dependent protein kinase/NADPH oxidase activation circuit is required for rapid defense signal propagation. P. Natl. Acad. Sci. 110: 8744-8749, doi: 10.1073/pnas.1221294110.

  • Wurst, S. (2013). Plant-mediated links between detritivores and aboveground herbivores. Front. Plant Sci. 4: 380, doi: 10.3389/fpls.2013.00380.

2012

  • Balazadeh, S., Jaspert, N., Arif, M., Mueller-Roeber, B. and Maurino V.G. (2012). Expression of ROS-responsive genes and transcription factors after metabolic formation of H2O2 in chloroplasts. Front. Plant Sci. 3: 234, doi: 10.3389/fpls.2012.00234.

  • Beyaert, I., Köpke, D., Stiller, J., Hammerbacher, A., Yoneya, K., Schmidt, A., Gershenzon, J. and Hilker, M. (2012). Can insect egg deposition “warn“ a plant of future feeding damage by herbivorous larvae? Proc. Roy. Soc. London, Ser. B 279: 101–108, doi: 10.1098/rspb.2011.0468.

  • Brenner, W.G., Ramireddy, E., Heyl, A. and Schmülling, T. (2012). Gene regulation by cytokinin in Arabidopsis. Front. Plant. Sci. 3: 8, doi: 10.3389/fpls.2012.00008.

  • Brenner, W.G. and Schmülling, T. (2012). Transcript profiling of cytokinin action in Arabidopsis roots and shoots discovers largely similar but also organ-specific responses. BMC Plant Biol.12: 112, doi: 10.1186/1471-2229-12-112.

  • Degenkolbe, T., Giavalisco, P., Zuther, E., Seiwert, B., Hincha, D.K. and Willmitzer, L. (2012). Differential remodeling of the lipidome during cold acclimation in natural accessions of Arabidopsis thaliana. Plant J. 72: 972-982, doi: 10.1111/tpj.12007.

  • Juszczak, I. and Baier, M. (2012). The strength of the miR398-Csd2-CCS1 regulon is subject to natural variation in Arabidopsis thaliana. FEBS Lett. 586: 3385-3390, doi: 10.1016/j.febslet.2012.07.049.

  • Juszczak, I., Rudnik, R., Pietzenuk, B. and Baier, M. (2012). Natural genetic variation in the expression regulation of the chloroplast antioxidant system among Arabidopsis thaliana accessions. Physiol. Plant. 146: 53-70, doi: 10.1111/j.1399-3054.2012.01602.x.

  • Lai, A.G., Doherty, C.J., Mueller-Roeber, B., Kay, S.A., Schippers, J.H. and Dijkwel, P.P. (2012). CIRCADIAN CLOCK-ASSOCIATED 1 regulates ROS homeostasis and oxidative stress responses. Proc. Natl. Acad. Sci. USA 109: 17129-17134, doi: 10.1073/pnas.1209148109.

  • Lee, Y.P., Babakov, A., de Boer, B., Zuther, E. and Hincha, D.K. (2012). Comparison of freezing tolerance, compatible solutes and polyamines in geographically diverse collections of Thellungiella sp. and Arabidopsis thaliana accessions. BMC Plant Biol.12: 131, doi: 10.1186/1471-2229-12-131.

  • Schippers, J.H., Nguyen, H.M., Lu, D., Schmidt R. and Mueller-Roeber B. (2012). ROS homeostasis during development: an evolutionary conserved strategy. Cell Mol. Life Sci. 69: 3245-3257, doi: 10.1007/s00018-012-1092-4.

  • Shahnejat-Bushehri, S., Balazadeh, S. and Mueller-Roeber B.(2012). Arabidopsis NAC transcription factor JUNGBRUNNEN1 affects thermomemory-associated genes and enhances heat stress tolerance in primed and unprimed conditions. Plant Signal. Behav. 7: 1518–1521, doi: 10.4161/psb.22092.

  • Zuther, E., Schulz, E., Childs, L.H. and Hincha, D.K. (2012). Clinal variation in the non-acclimated and cold-acclimated freezing tolerance of Arabidopsis thaliana accessions. Plant Cell Environ. 35: 1860-1878, doi: 10.1111/j.1365-3040.2012.02522.x.